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Deduplicating the FDA adverse event reporting system with a novel application of network-based grouping
Spontaneous reporting systems like the Food and Drug Administration's (FDA) Adverse Event Reporting System (FAERS) are cri...
A systematic mapping study of semantic technologies in multi-omics data integration
Volume 165, May 2025, 104809Author links open overlay panel, , , , AbstractObjective:The integration of multi-omics data i...
CD-Tron: Leveraging large clinical language model for early detection of cognitive decline from electronic health records
Alzheimer’s disease and related dementias (AD/ADRD) rank among the top 10 leading causes of death in the United States [1]...
A transformer-based framework for temporal health event prediction with graph-enhanced representations
Electronic Health Records (EHRs) [1] are a comprehensive repository of patients’ health histories, medical visits, and rel...
Implementation of a digital maturity framework for biobanking
Available online 7 May 2025, 104842Author links open overlay panel, , , , , , , , , , , , , , , , , AbstractObjectiveDigit...
Low-cost algorithms for clinical notes phenotype classification to enhance epidemiological surveillance: A case study
In the field of epidemic intelligence, systematic information analysis is essential for detecting, verifying, evaluating, ...
RoBIn: A Transformer-based model for risk of bias inference with machine reading comprehension
Randomized Clinical Trials (RCTs) are considered the gold standard for evidence in the biomedical field [1]. However, the ...
Causal inference for time series datasets with partially overlapping variables
Causal relationships are essential for guiding effective interventions, especially in high-stakes settings like healthcare...
Leveraging natural language processing to elucidate real-world clinical decision-making paradigms: A proof of concept study
Volume 166, June 2025, 104829Author links open overlay panel, , , , AbstractBackgroundUnderstanding how clinicians arrive ...
Unsupervised discovery of clinical disease signatures using probabilistic independence
Volume 166, June 2025, 104837Author links open overlay panel, , , , , , , , AbstractObjectiveThis study uses probabilistic...
Leveraging undecided cases in chart-reviewed phenotypes to enhance EHR-based association studies
Electronic health records (EHR) contain a wide range of patient information, serving as a valuable resource for scientific...
Interpretable deep neural networks for advancing early neonatal birth weight prediction using multimodal maternal factors
The datasets generated during and/or analyzed during the current study are not publicly available because participant cons...
Multimodal fusion architectures for Alzheimer’s disease diagnosis: An experimental study
Alzheimer’s disease (AD) is a neurodegenerative disorder that affects one-tenth of the population over 65 years of age. It...
Benchmarking domain-specific pretrained language models to identify the best model for methodological rigor in clinical studies
Volume 166, June 2025, 104825Author links open overlay panel, , , , , , AbstractObjectiveEncoder-only transformer-based la...