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Novel model organisms and proteomics for a better biological understanding
The concept of « model organisms » is being revisited in the light of the latest advances in multi-omics technologies that...
Multi-organ proteome reveals different nursing ability between two honeybee srocks
Honey bee colonies operate as a highly organized superorganism, functioning as a single integrated organism rather than ju...
Characterization of substrate distribution and functional implication of lysine acylations in Staphylococcus aureus
Staphylococcus aureus is a gram-positive bacterium and present on the skin and in the nasal passages of approximately 30 %...
Comparative proteomic profiling of glioblastoma and healthy brain cell-derived extracellular vesicles reveals enrichment of cancer-associated proteins
Glioblastoma is one of the most aggressive forms of brain cancer, characterized by rapid metastasis [1], treatment resisti...
Proteomics reveals genetic mechanisms of cold resistance in Hezuo pig liver tissue
Cold resistance refers to the ability to tolerate cold conditions, gradually developed through natural selection during th...
Skin mucus and blood plasma as non-lethal sources of malnutrition protein biomarkers in meagre (Argyrosomus regius)
Although still produced on a small scale [1], meagre (Argyrosomus regius) is a fish species with the potential to expand i...
Proteomics of Sternaspis chinensis to understand phosphate biomineralization in annelids
Carbonate and phosphate biominerals, such as bones and shells, confer critical mechanical support and protection to variou...
Serum N-glycoproteomics characterization of differential N-glycosylation in schizophrenia
Psychiatric disorders including depression, anxiety disorder, schizophrenia affect approximately one in eight people globa...
Proteomic insights into the molecular mechanism of anlotinib inhibition in TP53-mutated non-small cell lung cancer
Lung cancer is a malignant tumor whose incidence is rapidly increasing worldwide. GLOBOCAN estimated approximately 2.2 mil...
Proteomic insights into cell signaling and stress response mechanisms in Chaetoceros muelleri under nitrogen limitation
The diatom is considered one of Earth's most abundant and diverse algae groups [1]. They use chlorophyll a, c, and other p...
iTRAQ-based quantitative proteomics reveals dysregulation of fibronectin 1 contributes to impaired endometrial decidualization in recurrent implantation failure
With the advancement of in vitro fertilization-embryo transfer (IVF-ET), various aspects from controlled ovarian stimulati...
Spatial and development responses in the wheat leaf highlight the loss of chloroplast protein homeostasis during salt stress
Salinity stress in wheat affects physiological and biochemical parameters in tissues that alter plant development and ulti...
Proteomics analysis of the mechanism of the treatment of corneal injury in dry-eye mice
Dry Eye Disease (DED) is a multifactorial ocular surface disorder with a global prevalence ranging from 5 % to 50 % [1]. I...
Integrative approaches for predicting protein network perturbations through machine learning and structural characterization
In recent years, the study of protein interactions within cells has gained considerable attention due to their essential r...
The dawn of the revolution that will allow us to precisely describe how microbiomes function
The community of microorganisms inhabiting a specific environment, such as the human gut - including bacteria, fungi, arch...
Comprehensive biobanking strategy with clinical impact at the European Cancer Moonshot Lund Center
This white paper presents a comprehensive biobanking framework developed at the European Cancer Moonshot Lund Center that ...
Integrative transcriptomic, proteomic, biochemical and neutralization studies on the venom of Micrurus ephippifer
Coral snakes of the American continent are the most diverse group within the Elapidae family. They are represented by thre...
Revisiting toxins with transcriptomics-informed proteomics of venom glands and crude venom from Centruroides bicolor from Panama
Scorpion stings of the Centruroides genus in Panama cause high morbidity rates, although no deaths have been reported [1]....
Ibaqpy: A scalable Python package for baseline quantification in proteomics leveraging SDRF metadata
Intensity-based absolute quantification (iBAQ) is essential in proteomics as it allows for the assessment of a protein's a...
Comparative secretome analysis of Oudemansiella raphanipes grown on different agricultural residues
Lignocellulose, the main component of wood and agro-residues, represents the most abundant biomass available on Earth [1,2...
Machine learning approach to predict blood-secretory proteins and potential biomarkers for liver cancer using omics data
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Proteomic analysis of peripheral blood mononuclear cells in first episode psychosis – Protein and peptide-centered approaches to elucidate potential diagnostic biomarkers
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Characterizing Leishmania infantum-induced resistance to trivalent stibogluconate (SbIII) through deep proteomics
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Decoding the impact of neighboring amino acids on ESI-MS intensity output through deep learning
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Integrated transcriptomic and proteomic analysis revealed the regulatory role of 5-azacytidine in kenaf salt stress alleviation
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DIA proteomic and PRM validation through human granulose cells profiles screen suitable biomarkers for polycystic ovary syndrome patients
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Corrigendum to “Unbiased differential proteomic profiling between cancer-associated fibroblasts and cancer cell lines” [Journal of Proteomics (2023) Volume 288, Article number 104973]
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Protein degradation patterns as biomarkers for post-mortem interval estimation: A comprehensive review of proteomic approaches in forensic science
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Unravelling the role of NDUFAF4 in Colon Cancer: Insights from multi-omics analysis
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Tandem mass tag-based proteomic analysis of granulosa and theca interna cells of the porcine ovarian follicle following in vitro treatment with vitamin D3 and insulin alone or in combination
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