Metagenomic Analysis of Pulp and Paper Wastes and Prospects for Their Self-purification

Singh BJ, Chakraborty A, Sehgal R (2023) A systematic review of industrial wastewater management: evaluating challenges and enablers. J Environ Manag 348:119–230. https://doi.org/10.1016/j.jenvman.2023.119230

Article  Google Scholar 

Wang Y, Liu Q, Yan L et al (2013) A novel lignin degradation bacterial consortium for efficient pulping. Bioresour Technol 139:113–119. https://doi.org/10.1016/J.BIORTECH.2013.04.033

Article  CAS  PubMed  Google Scholar 

Simão L, Hotza D, Raupp-Pereira F, Labrincha JA, Montedo ORK (2018) Wastes from pulp and paper mills: a review of generation and recycling alternatives. Cerâmica 64(371):443–453. https://doi.org/10.1590/0366-69132018643712414

Article  CAS  Google Scholar 

Gupta A, Tiwari A, Ghosh P et al (2023) Enhanced lignin degradation of paddy straw and pine needle biomass by combinatorial approach of chemical treatment and fungal enzymes for pulp making. Biores Technol 368:128–314. https://doi.org/10.1016/j.biortech.2022.128314

Article  CAS  Google Scholar 

Nadányi R, Ház A, Lisý A, Jablonský M, Šurina I, Majová V, Baco A (2022) Lignin modifications, applications, and possible market prices. Energies 15(18):6520. https://doi.org/10.3390/en15186520

Article  CAS  Google Scholar 

Liu X, Bouxin FP, Fan J, Budarin VL, Hu C, Clark JH (2020) Recent advances in the catalytic depolymerization of lignin towards phenolic chemicals: a review. Chemsuschem 13:4296–4317. https://doi.org/10.1002/cssc.202001213

Article  CAS  PubMed  PubMed Central  Google Scholar 

Li X, Zheng Y (2020) Biotransformation of lignin: mechanisms, applications and future work. Biotechnol Progress 36:e2922. https://doi.org/10.1002/btpr.2922

Article  CAS  Google Scholar 

Sime AM, Kifle BA, Woldesemayat AA (2024) Microbial carbohydrate active enzyme (CAZyme) genes and diversity from Menagesha Suba natural forest soils of Ethiopia as revealed by shotgun metagenomic sequencing. BMC Microbiol 24:285. https://doi.org/10.1186/s12866-024-03436-9

Article  CAS  PubMed  PubMed Central  Google Scholar 

Chen YH, Chai LY, Zhu YH et al (2012) Biodegradation of kraft lignin by a bacterial strain Comamonas sp. B-9 isolated from eroded bamboo slips. J Appl Microbiol 112:900–906. https://doi.org/10.1111/J.1365-2672.2012.05275.X

Article  CAS  PubMed  Google Scholar 

Zhou H, Guo W, Xu B et al (2017) Screening and identification of lignin-degrading bacteria in termite gut and the construction of LiP-expressing recombinant Lactococcus lactis. Microb Pathog 112:63–69. https://doi.org/10.1016/J.MICPATH.2017.09.047

Article  CAS  PubMed  Google Scholar 

Liu ZH, Hao N, Wang YY, Dou C, Lin F, Shen R, Bura R, Hodge DB, Dale BE, Ragauskas AJ, Yang B, Yuan JS (2021) Transforming biorefinery designs with ‘Plug-In Processes of Lignin’ to enable economic waste valorization. Nat Commun 12(1):3912. https://doi.org/10.1038/s41467-021-23920-4

Article  CAS  PubMed  PubMed Central  Google Scholar 

Kalntremtziou M, Papaioannou IA, Vangalis V, Polemis E, Pappas KM, Zervakis GI, Typas MA (2023) Evaluation of the lignocellulose degradation potential of Mediterranean forests soil microbial communities through diversity and targeted functional metagenomics. Front Microbiol 14:1121993. https://doi.org/10.3389/fmicb.2023.1121993

Article  PubMed  PubMed Central  Google Scholar 

Langmead B, Salzberg SL (2012) Fast gapped-read alignment with Bowtie 2. Nat Methods 9:357–359. https://doi.org/10.1038/NMETH.1923

Article  CAS  PubMed  PubMed Central  Google Scholar 

Meyer F, Paarmann D, D’Souza M et al (2008) The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes. BMC Bioinform. https://doi.org/10.1186/1471-2105-9-386

Article  Google Scholar 

Kanehisa M, Goto S (2000) KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res 28:27–30. https://doi.org/10.1093/NAR/28.1.27

Article  CAS  PubMed  PubMed Central  Google Scholar 

Menzel P, Ng KL, Krogh A (2016) Fast and sensitive taxonomic classification for metagenomics with Kaiju. Nat Commun. https://doi.org/10.1038/NCOMMS11257

Article  PubMed  PubMed Central  Google Scholar 

Sobala ŁF (2023) Evolution and phylogenetic distribution of endo-α-mannosidase. Glycobiology 33–9:687–699. https://doi.org/10.1093/glycob/cwad041

Article  Google Scholar 

Su H, Xiao Z, Yu K, Zhang Q et al (2021) High diversity of β-glucosidase-producing bacteria and their genes associated with scleractinian corals. Int J Mol Sci 22(7):3523. https://doi.org/10.3390/ijms22073523

Article  CAS  PubMed  PubMed Central  Google Scholar 

SkP S, Govindaswamy V (2015) Therapeutical properties of ferulic acid and bioavailability enhancement through feruloyl esterase. Journal of Functional Foods 17:657–666. https://doi.org/10.1016/j.jff.2015.06.013

Article  CAS  Google Scholar 

Suturin AN, Goncharov AI, Dambinov YuA et al (2021) Remediation of the Solzan Industrial Waste Landfill at the Baikal Pulp and Paper Mill (BPPM). Ecol Ind Russia 25(2):41–47. https://doi.org/10.18412/1816-0395-2021-2-41-47

Article  Google Scholar 

Paulsen Thoresen P, Lange H, Crestini C et al (2021) Characterization of Organosolv Birch Lignins: toward application-specific lignin production. ACS Omega 6(6):4374–4385. https://doi.org/10.1021/acsomega.0c05719

Article  CAS  PubMed  PubMed Central  Google Scholar 

Brown ME, Walker MC, Nakashige TG et al (2011) Discovery and characterization of heme enzymes from unsequenced bacteria: application to microbial lignin degradation. J Am Chem Soc 133:18006–18009. https://doi.org/10.1021/JA203972Q

Article  CAS  PubMed  Google Scholar 

Vagts J, Kalvelage K, Weiten A et al (2021) Responsiveness of Aromatoleum aromaticum EbN1T to lignin-derived phenylpropanoids. Appl Environ Microbiol 87:1–19. https://doi.org/10.1128/AEM.03140-20

Article  Google Scholar 

Dwivedi UN, Singh P, Pandey VP, Kumar A (2011) Structure-function relationship among bacterial, fungal and plant laccases. J Mol Catal B Enzym 68:117–128. https://doi.org/10.1016/J.MOLCATB.2010.11.002

Article  CAS  Google Scholar 

Beukes N, Pletschke BI (2006) Effect of sulfur-containing compounds on Bacillus cellulosome-associated “CMCase” and “Avicelase” activities. FEMS Microbiol Lett 264:226–231. https://doi.org/10.1111/J.1574-6968.2006.00465.X

Article  CAS  PubMed  Google Scholar 

Chen P, Yan L, Zhang S et al (2017) Optimizing bioconversion of ferulic acid to vanillin by Bacillus subtilis in the stirred packed reactor using Box-Behnken design and desirability function. Food Sci Biotechnol 26:143–152. https://doi.org/10.1007/S10068-017-0019-0

Article  CAS  PubMed  PubMed Central  Google Scholar 

Lee S, Kang M, Bae JH et al (2019) Bacterial valorization of lignin: strains, enzymes, conversion pathways, biosensors, and perspectives. Front Bioeng Biotechnol. https://doi.org/10.3389/FBIOE.2019.00209

Article  PubMed  PubMed Central  Google Scholar 

Kataeva I, Foston MB, Yang SJ et al (2013) Carbohydrate and lignin are simultaneously solubilized from unpretreated switchgrass by microbial action at high temperature. Energy Environ Sci 6:2186–2195. https://doi.org/10.1039/C3EE40932E

Article  CAS  Google Scholar 

Deschamps AM, Mahoudeau G, Lebeault JM (1980) Fast degradation of kraft lignin by bacteria. Eur J Appl Microbiol Biotechnol 9:45–51. https://doi.org/10.1007/BF00500001/METRICS

Article  CAS  Google Scholar 

Carrillo-Nieves D, Rostro Alanís MJ, de la Cruz QR et al (2019) Current status and future trends of bioethanol production from agro-industrial wastes in Mexico. Renew Sustain Energy Rev 102:63–74.

Comments (0)

No login
gif