Development of Biological Microchips on an Aluminum Support with Cells Made of Brush Polymers

Yershov G., Barsky V., Belgovskiy A., Kirillov E., Kreindlin E., Ivanov I., Parinov S., Guschin D., Drobishev A., Dubiley S., Mirzabekov A. 1996. DNA analysis and diagnostics on oligonucleotide microchips. Proc. Natl. Acad. Sci. U. S. A. 93, 4913‒4918. https://doi.org/10.1073/pnas.93.10.4913

Article  CAS  PubMed  PubMed Central  Google Scholar 

Beaudet A.L., Belmont J.W. 2008. Array-based DNA diagnostics: Let the revolution begin. Annu. Rev. Med. 59, 113‒129. https://doi.org/10.1146/annurev.med.59.012907.101800

Article  CAS  PubMed  Google Scholar 

Gryadunov D., Dementieva E., Mikhailovich V., Nasedkina T., Rubina A., Savvateeva E., Fesenko E., Chudinov A., Zimenkov D., Kolchinsky A., Zasedatelev A. 2011. Gel-based microarrays in clinical diagnostics in Russia. Exp. Rev. Mol. Diagn. 11, 839–853. https://doi.org/10.1586/ERM.11.73

Article  CAS  Google Scholar 

Strizhkov B.N., Drobyshev A.L., Mikhailovich V.M., Mirzabekov A.D. 2000. PCR amplification on a microarray of gel-immobilized oligonucleotides: detection of bacterial toxin- and drug-resistant genes and their mutations. BioTechniques. 29, 844‒857. https://doi.org/10.2144/00294rr01

Article  CAS  PubMed  Google Scholar 

Tillib S.V., Strizhkov B.N., Mirzabekov A.D. 2001. Integration of multiple PCR amplifications and DNA mutation analyses by using oligonucleotide microchip. Analyt. Biochem. 292, 155–160. https://doi.org/10.1006/abio.2001.5082l

Article  CAS  PubMed  Google Scholar 

Pemov A., Modi H., Chandler D.P., Bavykin S. 2005. DNA analysis with multiplex microarray-enhanced PCR. Nucleic Acids Res. 33, e11. https://doi.org/10.1093/nar/gnh184

Article  CAS  PubMed  PubMed Central  Google Scholar 

Khodakov D.A., Zakharova N.V., Gryadunov D.A., Filatov F.P., Zasedatelev A.S., Mikhailovich V.M. 2008. An oligonucleotide microarray for multiplex real-time PCR identification of HIV-1, HBV, and HCV. BioTechniques. 44, 241–248. https://doi.org/10.2144/000112628

Article  CAS  PubMed  Google Scholar 

Chudinov A.V., Kolganova N.A., Egorov A.E., Fesenko D.O., Kuznetsova V.E., Nasedkina T.V., Vasiliskov V.A., Zasedatelev A.S., Timofeev E.N. 2015. Bridge DNA amplification of cancer-associated genes on cross-linked agarose microbeads. Microchim. Acta. 182, 557‒463. https://doi.org/10.1007/s00604-014-1357-8

Article  CAS  Google Scholar 

Lapa S.A., Klochikhina E.S., Miftakhov R.A., Zasedatelev A.S., Chudinov A.V. 2021. Multiplex on-chip PCR with direct detection of immobilized primer elongation. Russ. J. Bioorg. Chem. 47, 1122‒1125. https://doi.org/10.1134/S1068162021050290

Article  CAS  Google Scholar 

Lapa S.A., Miftakhov R.A., Klochikhina E.S., Ammur Yu.I., Blagodatskikh S.A., Shershov V.E., Zasedatelev A.S., Chudinov A.V. 2021. Development of multiplex RT-PCR with immobilized primers for identification of infectious human pneumonia pathogens. Mol. Biol. (Moscow). 55, 828‒838. https://doi.org/10.1134/S0026893321040063

Article  CAS  PubMed  PubMed Central  Google Scholar 

Lysov Y., Barsky V., Urasov D., Urasov R., Cherepanov A., Mamaev D., Yegorov Y., Chudinov A., Surzhikov S., Rubina A., Smoldovskaya O., Zasedatelev A. 2017. Microarray analyzer based on wide field fluorescent microscopy with laser illumination and a device for speckle suppression. Biomed. Optics Express. 8, 4798‒4810. https://doi.org/10.1364/BOE.8.004798

Article  CAS  Google Scholar 

Spitsyn M.A., Kuznetsova V.E., Shershov V.E., Emelyanova M.A., Guseinov T.O., Lapa S.A., Nasedkina T.V., Zasedatelev A.S., Chudinov A.V. 2017. Synthetic route to novel zwitterionic pentamethine indocyanine fluorophores with various substitutions. Dyes Pigments. 147, 199‒210. https://doi.org/10.1016/j.dyepig.2017.07.052

Article  CAS  Google Scholar 

Barsky V., Perov A., Tokalov S., Chudinov A., Kreindlin E., Sharonov A., Kotova E., Mirzabekov A. 2002. Fluorescence data analysis on gel-based biochips. J. Biomol. Screening. 7, 247‒257. https://doi.org/10.1177/108705710200700308

Article  CAS  Google Scholar 

Miftakhov R.A., Ikonnikova A.Yu., Vasiliskov V.A., Lapa S.A., Levashova A.I., Kuznetsova V.E., Shershov V.E., Zasedatelev A.S., Nasedkina T.V., Chudinov A.V. 2023. A DNA biochip with cells of carboxylated brush polymers. Russ. J. Bioorg. Chem. 49, 1143‒1150.

Article  CAS  Google Scholar 

Lee J.G., Cheong K.H., Huh N., Kim S., Choi J.W., Ko C. 2006. Microchip-based one step DNA extraction and real-time PCR in one chamber for rapid pathogen identification. Lab. Chip. 6, 886–895. https://doi.org/10.1039/B515876A

Article  CAS  PubMed  Google Scholar 

Sin E.J., Moon Y.S., Lee Y.K., Lim J.O., Huh J.S., Choi S.Y., Sohn Y.S. 2012. Surface modification of aluminum oxide for biosensing application. Biomed. Eng. Appl., Basis, Commun. 24, 111‒116. https://doi.org/10.1142/S1016237212500093

Article  CAS  Google Scholar 

Chai C., Lee J., Takhistove P. 2010. Direct detection of the biological toxin in acidic environment by electrochemical impedimetric immunosensor. Sensors. 10, 11414–11427. https://doi.org/10.3390/s101211414

Article  CAS  PubMed  PubMed Central  Google Scholar 

Spitsyn M.A., Kuznetsova V.E., Shershov V.E., Emelyanova M.A., Guseinov T.O., Lapa S.A., Nasedkina T.V., Zasedatelev A.S., Chudinov A.V. 2017. Synthetic route to novel zwitterionic pentamethine indocyanine fluorophores with various substitutions. Dyes Pigments. 147, 199‒210. https://doi.org/10.1016/j.dyepig.2017.07.052

Article  CAS  Google Scholar 

Schubert J., Chanana M. 2019. Coating matters: Review on colloidal stability of nanoparticles with biocompatible coatings in biological media, living cells and organisms. Curr. Med. Chem. 25(35), 4556–4586. https://doi.org/10.2174/0929867325666180601101859

Article  CAS  PubMed Central  Google Scholar 

Sim Y.J., Seo E.K. Choi G.J., Yoon S.J., Jang J. 2009. UV-induced crosslinking of poly(vinil acetate) films containing benzophenone. J. Korean Soc. Dyers Finishers. 21 (4), 33‒38. https://doi.org/10.5764/TCF.2009.21.4.033

Article  Google Scholar 

Qu B.J., Xu Y.H., Ding L.H., Ranby B. 2000. A new mechanism of benzophenone photoreduction in photoinitiated crosslinking of polyethylene and its model compounds. J. Polym. Sci. A: Polym. Chem. 38 (6), 999‒1005. https://doi.org/10.1002/(SICI)1099-0518(20000315)38:6<999::AID-POLA9>3.0.CO;2-1

Ogiwara Y., Kanda M., Takumi M., Kubota H. 1981. Photosensitized grafting on polyolefin films in vapor and liquid phases. J. Polym. Sci. Polym. Lett. Ed. 19, 457. https://doi.org/10.1002/pol.1981.130190905

Article  CAS  Google Scholar 

Miftakhov R.A., Lapa S.A., Shershov V.E., Zasedateleva O.A., Guseinov T.O., Spitsyn M.A., Kuznet-sova V.E., Mamaev D.D., Lysov Yu.P., Barsky V.E., Timofeev E.N., Zasedatelev A.S., Chudinov A.V. 2018. Generation of active carboxyl groups on the surface of a polyethylene terephthalate film and their quantitation by digital fluorescence microscopy. Biophysics (Moscow). 4, 512‒518. https://doi.org/10.1134/S0006350918040127

Article  Google Scholar 

Sorokin N.V., Chechetkin V.R., Livshits M.A., Pan’kov S.V., Donnikov M.Y., Gryadunov D.A., Lapa S.A., Zasedatelev A.S. 2014. Discrimination between perfect and mismatched duplexes with oligonucleotide gel microchips: Role of thermodynamic and kinetic effects during hybridization. J. Biomol. Struct. Dyn. 22, 725‒734. https://doi.org/10.1080/07391102.2005.10507039

Article  Google Scholar 

Comments (0)

No login
gif