Adamczyk-Poplawska M, Markowicz S, Jagusztyn-Krynicka EK (2011) Proteomics for development of vaccine. J Proteom 74(12):2596–2616. https://doi.org/10.1016/j.jprot.2011.01.019

Article  CAS  Google Scholar 

Alejo A, Matamoros T, Guerra M, Andres G (2018) A Proteomic Atlas of the African Swine Fever Virus Particle. J Virol. https://doi.org/10.1128/JVI.01293-18

Article  PubMed  PubMed Central  Google Scholar 

Andres G, Alejo A, Salas J, Salas ML (2002) African swine fever virus polyproteins pp220 and pp62 assemble into the core shell. J Virol 76(24):12473–12482. https://doi.org/10.1128/jvi.76.24.12473-12482.2002

Article  PubMed  PubMed Central  CAS  Google Scholar 

Argilaguet JM, Perez-Martin E, Nofrarias M, Gallardo C, Accensi F, Lacasta A, Mora M, Ballester M, Galindo-Cardiel I, Lopez-Soria S, Escribano JM, Reche PA, Rodriguez F (2012) DNA vaccination partially protects against African swine fever virus lethal challenge in the absence of antibodies. PLoS ONE 7(9):e40942. https://doi.org/10.1371/journal.pone.0040942

Article  PubMed  PubMed Central  CAS  Google Scholar 

Bandrick M, Gutierrez AH, Desai P, Rincon G, Martin WD, Terry FE, De Groot AS, Foss DL (2020) T cell epitope content comparison (EpiCC) analysis demonstrates a bivalent PCV2 vaccine has greater T cell epitope overlap with field strains than monovalent PCV2 vaccines. Vet Immunol Immunopathol 223:110034. https://doi.org/10.1016/j.vetimm.2020.110034

Article  PubMed  CAS  Google Scholar 

Bappy SS, Sultana S, Adhikari J, Mahmud S, Khan MA, Kibria KMK, Rahman MM, Shibly AZ (2021) Extensive immunoinformatics study for the prediction of novel peptide-based epitope vaccine with docking confirmation against envelope protein of Chikungunya virus: a computational biology approach. J Biomol Struct Dyn 39(4):1139–1154. https://doi.org/10.1080/07391102.2020.1726815

Article  PubMed  CAS  Google Scholar 

Baratelli M, Morgan S, Hemmink JD, Reid E, Carr BV, Lefevre E, Montaner-Tarbes S, Charleston B, Fraile L, Tchilian E, Montoya M (2020) Identification of a newly conserved SLA-II Epitope in a structural protein of Swine Influenza Virus. Front Immunol 11:2083. https://doi.org/10.3389/fimmu.2020.02083

Article  PubMed  PubMed Central  CAS  Google Scholar 

Bhasin M, Raghava GP (2004) Analysis and prediction of affinity of TAP binding peptides using cascade SVM. Protein Sci 13(3):596–607. https://doi.org/10.1110/ps.03373104

Article  PubMed  PubMed Central  CAS  Google Scholar 

Blome S, Franzke K, Beer M (2020) African swine fever - A review of current knowledge. Virus Res 287:198099. https://doi.org/10.1016/j.virusres.2020.198099

Article  PubMed  CAS  Google Scholar 

Bosch-Camos L, Lopez E, Rodriguez F (2020) African swine fever vaccines: a promising work still in progress. Porcine Health Manag 6:17. https://doi.org/10.1186/s40813-020-00154-2

Article  PubMed  PubMed Central  Google Scholar 

Bosch-Camos L, Lopez E, Navas MJ, Pina-Pedrero S, Accensi F, Correa-Fiz F, Park C, Carrascal M, Dominguez J, Salas ML, Nikolin V, Collado J, Rodriguez F (2021) Identification of Promiscuous African Swine Fever Virus T-Cell Determinants Using a Multiple Technical Approach. Vaccines (Basel). https://doi.org/10.3390/vaccines9010029

Article  PubMed  Google Scholar 

Burmakina G, Malogolovkin A, Tulman ER, Xu W, Delhon G, Kolbasov D, Rock DL (2019) Identification of T-cell epitopes in African swine fever virus CD2v and C-type lectin proteins. J Gen Virol 100(2):259–265. https://doi.org/10.1099/jgv.0.001195

Article  PubMed  CAS  Google Scholar 

Calis JJ, Maybeno M, Greenbaum JA, Weiskopf D, De Silva AD, Sette A, Kesmir C, Peters B (2013) Properties of MHC class I presented peptides that enhance immunogenicity. PLoS Comput Biol 9(10):e1003266. https://doi.org/10.1371/journal.pcbi.1003266

Article  PubMed  PubMed Central  Google Scholar 

Clem AS (2011) Fundamentals of vaccine immunology. J Glob Infect Dis 3(1):73–78. https://doi.org/10.4103/0974-777X.77299

Article  PubMed  PubMed Central  CAS  Google Scholar 

Cobbold C, Wileman T (1998) The major structural protein of African swine fever virus, p73, is packaged into large structures, indicative of viral capsid or matrix precursors, on the endoplasmic reticulum. J Virol 72(6):5215–5223. https://doi.org/10.1128/JVI.72.6.5215-5223.1998

Article  PubMed  PubMed Central  CAS  Google Scholar 

Dorigatti E, Schubert B (2020) Graph-theoretical formulation of the generalized epitope-based vaccine design problem. PLoS Comput Biol 16(10):e1008237. https://doi.org/10.1371/journal.pcbi.1008237

Article  PubMed  PubMed Central  CAS  Google Scholar 

Fan S, Wang Y, Wang X, Huang L, Zhang Y, Liu X, Zhu W (2018) Analysis of the affinity of influenza a virus protein epitopes for swine MHC I by a modified in vitro refolding method indicated cross-reactivity between swine and human MHC I specificities. Immunogenetics 70(10):671–680. https://doi.org/10.1007/s00251-018-1070-6

Article  PubMed  CAS  Google Scholar 

Gao Z, Shao JJ, Zhang GL, Ge SD, Chang YY, Xiao L, Chang HY (2021) Development of an indirect ELISA to specifically detect antibodies against African swine fever virus: bioinformatics approaches. Virol J 18(1):97. https://doi.org/10.1186/s12985-021-01568-2

Article  PubMed  PubMed Central  CAS  Google Scholar 

Garcia-Boronat M, Diez-Rivero CM, Reinherz EL, Reche PA (2008) PVS: a web server for protein sequence variability analysis tuned to facilitate conserved epitope discovery. Nucleic Acids Res. https://doi.org/10.1093/nar/gkn211

Article  PubMed  PubMed Central  Google Scholar 

Gaudreault NN, Richt JA (2019) Subunit Vaccine Approaches for African Swine Fever Virus. Vaccines (Basel). https://doi.org/10.3390/vaccines7020056

Article  PubMed  Google Scholar 

Gerner W, Talker SC, Koinig HC, Sedlak C, Mair KH, Saalmuller A (2015) Phenotypic and functional differentiation of porcine alphabeta T cells: current knowledge and available tools. Mol Immunol 66(1):3–13. https://doi.org/10.1016/j.molimm.2014.10.025

Article  PubMed  CAS  Google Scholar 

Gomez-Puertas P, Rodriguez F, Oviedo JM, Ramiro-Ibanez F, Ruiz-Gonzalvo F, Alonso C, Escribano JM (1996) Neutralizing antibodies to different proteins of African swine fever virus inhibit both virus attachment and internalization. J Virol 70(8):5689–5694. https://doi.org/10.1128/JVI.70.8.5689-5694.1996

Article  PubMed  PubMed Central  CAS  Google Scholar 

Gomez-Puertas P, Rodriguez F, Oviedo JM, Brun A, Alonso C, Escribano JM (1998) The African swine fever virus proteins p54 and p30 are involved in two distinct steps of virus attachment and both contribute to the antibody-mediated protective immune response. Virology 243(2):461–471. https://doi.org/10.1006/viro.1998.9068

Article  PubMed  CAS  Google Scholar 

Gul I, Hassan A, Muneeb JM, Akram T, Haq E, Shah RA, Ganai NA, Ahmad SM, Chikan NA, Shabir N (2022) A multiepitope vaccine candidate against infectious bursal disease virus using immunoinformatics-based reverse vaccinology approach. Front Vet Sci 9:1116400. https://doi.org/10.3389/fvets.2022.1116400

Article  PubMed  Google Scholar 

Guo F, Tang Y, Zhang W, Yuan H, Xiang J, Teng W, Lei A, Li R, Dai G (2022) DnaJ, a promising vaccine candidate against Ureaplasma urealyticum infection. Appl Microbiol Biotechnol 106(22):7643–7659. https://doi.org/10.1007/s00253-022-12230-4

Article  PubMed  PubMed Central  CAS  Google Scholar 

Gupta S, Ansari HR, Gautam A, Open Source Drug Discovery C, Raghava GP (2013) Identification of B-cell epitopes in an antigen for inducing specific class of antibodies. Biol Direct 8:27. https://doi.org/10.1186/1745-6150-8-27

Article