Predicting the risk of pulmonary infection after kidney transplantation using machine learning methods: a retrospective cohort study

Bon D, Chatauret N, Giraud S, Thuillier R, Favreau F, Hauet T (2012) New strategies to optimize kidney recovery and preservation in transplantation. Nat Rev Nephrol 8(6):339–347. https://doi.org/10.1038/nrneph.2012.83

Article  CAS  PubMed  Google Scholar 

Calixto Fernandes MH, Schricker T, Magder S, Hatzakorzian R (2018) Perioperative fluid management in kidney transplantation: a black box. Crit Care 22(1):14. https://doi.org/10.1186/s13054-017-1928-2

Article  PubMed  PubMed Central  Google Scholar 

Voora S, Adey DB (2019) Management of kidney transplant recipients by general nephrologists: core curriculum 2019. Am J Kidney Dis 73(6):866–879. https://doi.org/10.1053/j.ajkd.2019.01.031

Article  PubMed  Google Scholar 

Fishman JA (2017) Infection in organ transplantation. Am J Transplant 17(4):856–879. https://doi.org/10.1111/ajt.14208

Article  CAS  PubMed  Google Scholar 

van Delden C, Stampf S, Hirsch HH, Manuel O, Meylan P, Cusini A, Hirzel C, Khanna N, Weisser M, Garzoni C et al (2020) Burden and timeline of infectious diseases in the first year after solid organ transplantation in the Swiss transplant cohort study. Clin Infect Dis 71(7):e159–e169. https://doi.org/10.1093/cid/ciz1113

Article  PubMed  PubMed Central  Google Scholar 

Kinnunen S, Karhapää P, Juutilainen A, Finne P, Helanterä I (2018) Secular trends in infection-related mortality after kidney transplantation. Clin J Am Soc Nephrol 13(5):755–762. https://doi.org/10.2215/cjn.11511017

Article  PubMed  PubMed Central  Google Scholar 

Shih CJ, Tarng DC, Yang WC, Yang CY (2014) Immunosuppressant dose reduction and long-term rejection risk in renal transplant recipients with severe bacterial pneumonia. Singapore Med J 55(7):372–377. https://doi.org/10.1622/smedj.2014089

Article  PubMed  PubMed Central  Google Scholar 

Sigera LSM, Denning DW (2023) Invasive aspergillosis after renal transplantation. J Fungi (Basel) 9(2):255. https://doi.org/10.3390/jof9020255

Article  CAS  PubMed  Google Scholar 

Mangalgi S, Madan K, Das CJ, Singh G, Sati H, Kanwar Yadav R, Xess I, Singh S, Bhowmik D, Agarwal SK et al (2021) Pulmonary infections after renal transplantation: a prospective study from a tropical country. Transpl Int 34(3):525–534. https://doi.org/10.1111/tri.13817

Article  PubMed  Google Scholar 

Agrawal A, Ison MG, Danziger-Isakov L (2022) Long-term infectious complications of kidney transplantation. Clin J Am Soc Nephrol 17(2):286–295. https://doi.org/10.2215/CJN.15971020

Article  CAS  PubMed  PubMed Central  Google Scholar 

Zhang Q, Liu H, Qiu S, Wang W, Yang L, Chen H, Chen X, Shen Z (2019) A rare case of pulmonary coinfection by Lichtheimia ramosa and Aspergillus fumigatus in a patient with delayed graft function after renal transplantation. Transplant Proc 51(2):551–555. https://doi.org/10.1016/j.transproceed.2018.12.006

Article  CAS  PubMed  Google Scholar 

Balcan B, Ozcelik U, Ugurlu AO, Aydin M, Nalcaci S, Yarbug Karakayali F (2018) Increased mortality among renal transplant patients with invasive pulmonary aspergillus infection. Prog Transplant 28(4):349–353. https://doi.org/10.1177/1526924818800044

Article  PubMed  Google Scholar 

Martins BCC, Mesquita KHC, Costa I, Chaves EF, Firmino PYM, Fernandes P, Fonteles MMF (2020) Hospital cost of complications after kidney transplant. Transplant Proc 52(5):1294–1298. https://doi.org/10.1016/j.transproceed.2020.02.070

Article  PubMed  Google Scholar 

Pérez-Jacoiste Asín MA, López-Medrano F, Fernández-Ruiz M, Silva JT, San Juan R, Kontoyiannis DP, Aguado JM (2021) Risk factors for the development of invasive aspergillosis after kidney transplantation: systematic review and meta-analysis. Am J Transplant 21(2):703–716. https://doi.org/10.1111/ajt.16248

Article  CAS  PubMed  Google Scholar 

López-Medrano F, Fernández-Ruiz M, Silva JT, Carver PL, van Delden C, Merino E, Pérez-Saez MJ, Montero M, Coussement J, de Abreu MM et al (2018) Multinational case–control study of risk factors for the development of late invasive pulmonary aspergillosis following kidney transplantation. Clin Microbiol Infect 24(2):192–198. https://doi.org/10.1016/j.cmi.2017.06.016

Article  PubMed  Google Scholar 

Lee SH, Huh KH, Joo DJ, Kim MS, Kim SI, Lee J, Park MS, Kim YS, Kim SK, Chang J et al (2017) Risk factors for Pneumocystis jirovecii pneumonia (PJP) in kidney transplantation recipients. Sci Rep 7(1):1571. https://doi.org/10.1038/s41598-017-01818-w

Article  CAS  PubMed  PubMed Central  Google Scholar 

Chinese Thoracic Society (2016) Diagnosis and treatment guidelines for acquired pneumonia in Chinese adults community. Tuberc Respir Dis 39(4):253–279

Google Scholar 

Perico N, Cattaneo D, Sayegh MH, Remuzzi G (2004) Delayed graft function in kidney transplantation. Lancet 364(9447):1814–1827. https://doi.org/10.1016/s0140-6736(04)17406-0

Article  PubMed  Google Scholar 

Bahl D, Haddad Z, Datoo A, Qazi YA (2019) Delayed graft function in kidney transplantation. Curr Opin Organ Transplant 24(1):82–86. https://doi.org/10.1097/mot.0000000000000604

Article  PubMed  Google Scholar 

Haas M, Loupy A, Lefaucheur C, Roufosse C, Glotz D, Seron D, Nankivell BJ, Halloran PF, Colvin RB, Akalin E et al (2018) The Banff 2017 kidney meeting report: revised diagnostic criteria for chronic active T cell-mediated rejection, antibody-mediated rejection, and prospects for integrative endpoints for next-generation clinical trials. Am J Transplant 18(2):293–307. https://doi.org/10.1111/ajt.14625

Article  CAS  PubMed  PubMed Central  Google Scholar 

Lang M, Binder M, Richter J, Schratz P, Pfisterer F, Coors S, Au Q, Casalicchio G, Kotthoff L, Bischl B (2019) mlr3: a modern object-oriented machine learning framework in R. J Open Source Softw. https://doi.org/10.1105/joss.01903

Article  Google Scholar 

Shan ZM, Ren XS, Shi H, Zheng SJ, Zhang C, Zhuang SY, Wu XT, Xie XH (2023) Machine learning prediction model and risk factor analysis of reoperation in recurrent lumbar disc herniation patients after percutaneous endoscopic lumbar discectomy. Global Spine J. https://doi.org/10.1177/21925682231173353

Article  PubMed  PubMed Central  Google Scholar 

Fisher A, Rudin C, Dominici F (2019) All models are wrong, but many are useful: learning a variable’s importance by studying an entire class of prediction models simultaneously. J Mach Learn Res 20:177

PubMed  PubMed Central  Google Scholar 

Yu LX, Zeng MX (2016) Clinical analysis of fungal infection in the lungs after renal transplantation. J South Med Univ 36(06):880–883

CAS  Google Scholar 

Tu G, Ju M, Zheng Y, Xu M, Rong R, Zhu D, Zhu T, Luo Z (2015) Early- and late-onset severe pneumonia after renal transplantation. Int J Clin Exp Med 8(1):1324–1332

PubMed  PubMed Central  Google Scholar 

Ghaffari Rahbar M, Nafar M, Khoshdel A, Dalili N, Abrishami A, Firouzan A, Poorrezagholi F, Samadian F, Ziaie S, Fatemizadeh S et al (2020) Low rate of COVID-19 pneumonia in kidney transplant recipients—a battle between infection and immune response? Transpl Infect Dis 22(5):e13406. https://doi.org/10.1111/tid.13406

Article  CAS  PubMed  PubMed Central  Google Scholar 

Travis CS (2010) A no free lunch theorem for multi-objective optimization. Inf Process Lett 110(21):917–923. https://doi.org/10.1016/j.ipl.2010.07.026

Article  Google Scholar 

Natekin A, Knoll A (2013) Gradient boosting machines, a tutorial. Front Neurorobot 7:21. https://doi.org/10.3389/fnbot.2013.00021

Article  PubMed  PubMed Central  Google Scholar 

Guo P, Wang Y, Xie ZY, Wang J (2010) Analysis of perioperative pulmonary infection after renal transplantation. Guangdong Med J 31(10):1290–1292. https://doi.org/10.13820/j.cnki.gdyx.2010.10.041

Article  CAS  Google Scholar 

Sun C (2020) Analysis of risk factors and prognosis for severe Pneumocystis jirovecii pneumonia in renal transplant recipients. Anhui Medical University, Anhui

Google Scholar 

Comments (0)

No login
gif