Afzali M, Pieciak T, Newman S, Garyfallidis E, Ozarslan E, Cheng H, Jones DK (2021) The sensitivity of diffusion MRI to microstructural properties and experimental factors. J Neurosci Methods 347:108951. https://doi.org/10.1016/j.jneumeth.2020.108951

Article  PubMed  PubMed Central  Google Scholar 

Al-Haddad BJS, Oler E, Armistead B, Elsayed NA, Weinberger DR, Bernier R, Burd I, Kapur R, Jacobsson B, Wang C, Mysorekar I, Rajagopal L, Adams Waldorf KM (2019) The fetal origins of mental illness. Am J Obstet Gynecol 221(6):549–562. https://doi.org/10.1016/j.ajog.2019.06.013

Article  PubMed  PubMed Central  CAS  Google Scholar 

Alexander AL, Hasan KM, Lazar M, Tsuruda JS, Parker DL (2001) Analysis of partial volume effects in diffusion-tensor MRI. Magn Reson Med 45(5):770–780. https://doi.org/10.1002/mrm.1105

Article  PubMed  CAS  Google Scholar 

Alexander AL, Lee JE, Lazar M, Field AS (2007) Diffusion tensor imaging of the brain. Neurotherapeutics 4(3):316–329. https://doi.org/10.1016/j.nurt.2007.05.011

Article  PubMed  PubMed Central  Google Scholar 

Alexander DC, Dyrby TB, Nilsson M, Zhang H (2019) Imaging brain microstructure with diffusion MRI: practicality and applications. NMR Biomed 32(4):e3841. https://doi.org/10.1002/nbm.3841

Article  PubMed  Google Scholar 

Andersson JLR, Sotiropoulos SN (2016) An integrated approach to correction for off-resonance effects and subject movement in diffusion MR imaging. NeuroImage 125:1063–1078. https://doi.org/10.1016/j.neuroimage.2015.10.019

Article  PubMed  Google Scholar 

Andersson JLR, Graham MS, Zsoldos E, Sotiropoulos SN (2016) Incorporating outlier detection and replacement into a non-parametric framework for movement and distortion correction of diffusion MR images. NeuroImage 141:556–572. https://doi.org/10.1016/j.neuroimage.2016.06.058

Article  PubMed  Google Scholar 

Andersson JLR, Graham MS, Drobnjak I, Zhang H, Filippini N, Bastiani M (2017) Towards a comprehensive framework for movement and distortion correction of diffusion MR images: within volume movement. NeuroImage 152:450–466. https://doi.org/10.1016/j.neuroimage.2017.02.085

Article  PubMed  Google Scholar 

Arsalidou M, Duerden EG, Taylor MJ (2013) The centre of the brain: topographical model of motor, cognitive, affective, and somatosensory functions of the basal ganglia. Hum Brain Mapp 34(11):3031–3054. https://doi.org/10.1002/hbm.22124

Article  PubMed  Google Scholar 

Avants BB, Tustison N, Song G (2009) Advanced normalization tools (ANTS). Insight j 2(365):1–35

Google Scholar 

Avants BB, Tustison NJ, Song G, Cook PA, Klein A, Gee JC (2011a) A reproducible evaluation of ANTs similarity metric performance in brain image registration. NeuroImage 54(3):2033–2044. https://doi.org/10.1016/j.neuroimage.2010.09.025

Article  PubMed  Google Scholar 

Avants BB, Tustison NJ, Wu J, Cook PA, Gee JC (2011b) An open source multivariate framework for n-tissue segmentation with evaluation on public data. Neuroinformatics 9(4):381–400. https://doi.org/10.1007/s12021-011-9109-y

Article  PubMed  PubMed Central  Google Scholar 

Bale TL, Baram TZ, Brown AS, Goldstein JM, Insel TR, McCarthy MM, Nemeroff CB, Reyes TM, Simerly RB, Susser ES, Nestler EJ (2010) Early life programming and neurodevelopmental disorders. Biol Psychiatry 68(4):314–319. https://doi.org/10.1016/j.biopsych.2010.05.028

Article  PubMed  PubMed Central  Google Scholar 

Ball G, Srinivasan L, Aljabar P, Counsell SJ, Durighel G, Hajnal JV, Rutherford MA, Edwards AD (2013) Development of cortical microstructure in the preterm human brain. Proc Natl Acad Sci U S A 110(23):9541–9546. https://doi.org/10.1073/pnas.1301652110

Article  PubMed  PubMed Central  Google Scholar 

Basser PJ (1995) Inferring microstructural features and the physiological state of tissues from diffusion-weighted images. NMR Biomed 8(7–8):333–344. https://doi.org/10.1002/nbm.1940080707

Article  PubMed  CAS  Google Scholar 

Basser PJ, Ozarslan E (2009) Introduction to Diffusion MR. Diffusion Mri: From Quantitative Measurement to in Vivo Neuroanatomy:3–10

Basser PJ, Pierpaoli C (1996) Microstructural and physiological features of tissues elucidated by quantitative-diffusion-tensor MRI. J Magn Reson B 111(3):209–219. https://doi.org/10.1006/jmrb.1996.0086

Article  PubMed  CAS  Google Scholar 

Batalle D, O’Muircheartaigh J, Makropoulos A, Kelly CJ, Dimitrova R, Hughes EJ, Hajnal JV, Zhang H, Alexander DC, Edwards AD, Counsell SJ (2019) Different patterns of cortical maturation before and after 38 weeks gestational age demonstrated by diffusion MRI in vivo. NeuroImage 185:764–775. https://doi.org/10.1016/j.neuroimage.2018.05.046

Article  PubMed  Google Scholar 

Batty MJ, Liddle EB, Pitiot A, Toro R, Groom MJ, Scerif G, Liotti M, Liddle PF, Paus T, Hollis C (2010) Cortical gray matter in attention-deficit/hyperactivity disorder: a structural magnetic resonance imaging study. J Am Acad Child Adolesc Psychiatry 49(3):229–238. https://doi.org/10.1016/j.jaac.2009.11.008

Article  PubMed  PubMed Central  Google Scholar 

Becker LE, Armstrong DL, Chan F, Wood MM (1984) Dendritic development in human occipital cortical neurons. Dev Brain Res 13(1):117–124. https://doi.org/10.1016/0165-3806(84)90083-X

Article  Google Scholar 

Birn RM, Dean DC, Wooten W, Planalp EM, Kecskemeti S, Alexander AL, Goldsmith HH, Davidson RJ (2022) Reduction of motion artifacts in functional connectivity resulting from Infrequent large motion. Brain Connect 12(8):740–753. https://doi.org/10.1089/brain.2021.0133

Article  PubMed  PubMed Central  Google Scholar 

Boisgueheneuc Fd, Levy R, Volle E, Seassau M, Duffau H, Kinkingnehun S, Samson Y, Zhang S, Dubois B (2006) Functions of the left superior frontal gyrus in humans: a lesion study. Brain 129(12):3315–3328. https://doi.org/10.1093/brain/awl244

Article  PubMed  Google Scholar 

Bouyssi-Kobar M, Brossard-Racine M, Jacobs M, Murnick J, Chang T, Limperopoulos C (2018) Regional microstructural organization of the cerebral cortex is affected by preterm birth. Neuroimage Clin 18:871–880. https://doi.org/10.1016/j.nicl.2018.03.020

Article  PubMed  PubMed Central  Google Scholar 

Cancelliere A, Mangano FT, Air EL, Jones BV, Altaye M, Rajagopal A, Holland SK, Hertzler DA, Yuan W (2013) DTI values in Key White Matter tracts from Infancy through Adolescence. Am J Neuroradiol 34(7):1443. https://doi.org/10.3174/ajnr.A3350

Article  PubMed  PubMed Central  CAS  Google Scholar 

Catani M, Dell’Acqua F, De Schotten MT (2013) A revised limbic system model for memory, emotion and behaviour. Neurosci Biobehavioral Reviews 37(8):1724–1737

Article  Google Scholar 

Cheour-Luhtanen M, Alho K, Kujala T, Sainio K, Reinikainen K, Renlund M, Aaltonen O, Eerola O, Näätänen R (1995) Mismatch negativity indicates vowel discrimination in newborns. Hear Res 82(1):53–58

Article  PubMed  CAS  Google Scholar 

De Asis-Cruz J, Andescavage N, Limperopoulos C (2022) Adverse prenatal exposures and fetal Brain Development: insights from advanced fetal magnetic resonance imaging. Biol Psychiatry: Cogn Neurosci Neuroimaging 7(5):480–490. https://doi.org/10.1016/j.bpsc.2021.11.009

Article  PubMed  Google Scholar 

Dean DC 3rd, Dirks H, O’Muircheartaigh J, Walker L, Jerskey BA, Lehman K, Han M, Waskiewicz N, Deoni SC (2014) Pediatric neuroimaging using magnetic resonance imaging during non-sedated sleep. Pediatr Radiol 44(1):64–72. https://doi.org/10.1007/s00247-013-2752-8

Article  PubMed  Google Scholar 

Dean DC 3rd, Planalp EM, Wooten W, Adluru N, Kecskemeti SR, Frye C, Schmidt CK, Schmidt NL, Styner MA, Goldsmith HH, Davidson RJ, Alexander AL (2017) Mapping White Matter Microstructure in the one Month Human Brain. Sci Rep 7(1):9759. https://doi.org/10.1038/s41598-017-09915-6

Article  PubMed  PubMed Central  Google Scholar 

Dean DC 3rd, Planalp EM, Wooten W, Kecskemeti SR, Adluru N, Schmidt CK, Frye C, Birn RM, Burghy CA, Schmidt NL, Styner MA, Short SJ, Kalin NH, Goldsmith HH, Alexander AL, Davidson RJ (2018a) Association of Prenatal Maternal Depression and anxiety symptoms with infant White Matter Microstructure. JAMA Pediatr 172(10):973–981. https://doi.org/10.1001/jamapediatrics.2018.2132

Article  PubMed